Name / Stock Number: WiscDsLoxHs021_06D / CS901964

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donor stock number: DsLoxHs021_06D

NASC stock number: N901964

Resource Type: seed

Availability: available

Donors:
  • Patrick Krysan

Donation Date: 10/15/2008

Date Released: 11/07/2008

Description:

Sequence-indexed T-DNA insertion line, generated by Agrobacterium-mediated transformation of Columbia (Col) plants with the T-DNA vector pDsLoxHs. Primary transformants were selected on Kanamycin plates. The pDsLoxHs vector contains a launchpad for a Ds transposon, as well as sites for Cre/ Lox recombination. A gene encoding the Ac transposase is also present on the T-DNA, under the control of a heat-shock inducible promoter. Two LoxP recombination sites are present in pDsLoxHs: one LoxP site is within the Ds portion of the vector and the other outside of the Ds element. May be segregating for phenotypes that are not linked to the insertion. May have additional insertions potentially segregating.

Growth Requirement: none

Marker:

Background: Col (Columbia)

ABRC Comment:

Format Shipped: 100 seeds per vial

Base / Commercial Price: $15 / $120

Genes

Gene Names Evidence
AT3G42178 polymorphism SIGnAL TAIR ARAPORT
AT2G32920
  • PDI-like 2-3
  • ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 9
  • PROTEIN DISULFIDE ISOMERASE 9
  • ATPDI9
  • ATPDIL2-3
  • PDI9
  • PDIL2-3
    		•  polymorphism SIGnAL TAIR ARAPORT
    AT5G39040
  • ATP-binding cassette B27
  • ALUMINUM SENSITIVE 1
  • ARABIDOPSIS THALIANA TRANSPORTER ASSOCIATED WITH ANTIGEN PROCESSING PROTEIN 2
  • transporter associated with antigen processing protein 2
  • AtALS1
  • ABCB27
  • ALS1
  • ATTAP2
  • TAP2
    		•  polymorphism SIGnAL TAIR ARAPORT
    AT1G76820 polymorphism SIGnAL TAIR ARAPORT
    AT1G43415 polymorphism SIGnAL TAIR ARAPORT
    AT1G18330
  • EPR1
  • RVE7
  • EARLY-PHYTOCHROME-RESPONSIVE1
  • REVEILLE 7
    		•  polymorphism SIGnAL TAIR ARAPORT
    AT1G30820
  • CTPS1
  • CTP synthase 1
    		•  polymorphism SIGnAL TAIR ARAPORT
    AT1G68690
  • proline-rich extensin-like receptor kinase 9
  • AtPERK9
  • PERK9
    		•  polymorphism SIGnAL TAIR ARAPORT
    AT1G70560
  • CKRC1
  • SAV3
  • TAA1
  • TIR2
  • WEI8
  • cytokinin induced root curling 1
  • SHADE AVOIDANCE 3
  • tryptophan aminotransferase of Arabidopsis 1
  • TRANSPORT INHIBITOR RESPONSE 2
  • WEAK ETHYLENE INSENSITIVE 8
    		•  polymorphism SIGnAL TAIR ARAPORT
    AT2G45770
  • CPFTSY
  • FRD4
  • FERRIC CHELATE REDUCTASE DEFECTIVE 4
    		•  polymorphism SIGnAL TAIR ARAPORT
    AT3G05975 polymorphism SIGnAL TAIR ARAPORT
    AT3G06370
  • ATNHX4
  • NHX4
  • sodium hydrogen exchanger 4
    		•  polymorphism SIGnAL TAIR ARAPORT
    AT3G49600
  • ATUBP26
  • SUP32
  • UBP26
  • ubiquitin-specific protease 26
    		•  polymorphism SIGnAL TAIR ARAPORT
    AT4G19460 polymorphism SIGnAL TAIR ARAPORT
    AT5G32386 polymorphism SIGnAL TAIR ARAPORT
    AT5G66960 polymorphism SIGnAL TAIR ARAPORT
    AT3TE58895 polymorphism SIGnAL TAIR ARAPORT
    AT1TE53975 polymorphism SIGnAL TAIR ARAPORT
    AT3G61826 polymorphism SIGnAL TAIR ARAPORT
    AT5TE42880 polymorphism SIGnAL TAIR ARAPORT
    AT3G61825 polymorphism SIGnAL TAIR ARAPORT

    Germplasm

    2

    Polymorphisms

    Polymorphism Mutagen Genotype Inheritance Gene Evidence attribution
    WISCSEQ_DSLOXHS021_06D.13 T-DNA insertion segregating
  • AT3G42178
  • AT3TE58895
    		• SIGnAL
    WISCSEQ_DSLOXHS021_06D.2 T-DNA insertion segregating
  • AT1G43415
  • AT1TE53975
    		• SIGnAL
    WISCSEQ_DSLOXHS021_06D.23 T-DNA insertion segregating
  • AT5G39040
    		• SIGnAL
    WISCSEQ_DSLOXHS021_06D.6 T-DNA insertion segregating
  • AT1G76820
    		• SIGnAL
    WISCSEQ_DSLOXHS021_06D.8 T-DNA insertion segregating
  • AT2G32920
    		• SIGnAL
    Wiscseq_DsLoxHs021_06D.7 T-DNA insertion segregating
  • AT1G18330
    		• SIGnAL
    Wiscseq_DsLoxHs021_06D.1 T-DNA insertion segregating
  • AT1G30820
    		• SIGnAL
    Wiscseq_DsLoxHs021_06D.3 T-DNA insertion segregating
  • AT1G68690
    		• SIGnAL
    Wiscseq_DsLoxHs021_06D.4 T-DNA insertion segregating
  • AT1G70560
    		• SIGnAL
    Wiscseq_DsLoxHs021_06D.10 T-DNA insertion segregating
  • AT2G45770
    		• SIGnAL
    Wiscseq_DsLoxHs021_06D.14 T-DNA insertion segregating
  • AT3G05975
    		• SIGnAL
    Wiscseq_DsLoxHs021_06D.16 T-DNA insertion segregating
  • AT3G06370
    		• SIGnAL
    Wiscseq_DsLoxHs021_06D.15 T-DNA insertion segregating
  • AT3G49600
    		• SIGnAL
    Wiscseq_DsLoxHs021_06D.19 T-DNA insertion segregating
  • AT3G61825
  • AT3G61826
    		• SIGnAL
    Wiscseq_DsLoxHs021_06D.21 T-DNA insertion segregating
  • AT4G19460
    		• SIGnAL
    Wiscseq_DsLoxHs021_06D.22 T-DNA insertion segregating
  • AT5G32386
  • AT5TE42880
    		• SIGnAL
    Wiscseq_DsLoxHs021_06D.24 T-DNA insertion segregating
  • AT5G66960
    		• SIGnAL
    WISCSEQ_DSLOXHS021_06D.18 T-DNA insertion segregating
    WISCSEQ_DSLOXHS021_06D.12 T-DNA insertion segregating
    WISCSEQ_DSLOXHS021_06D.20 T-DNA insertion segregating
    WISCSEQ_DSLOXHS021_06D.17 T-DNA insertion segregating
    WISCSEQ_DSLOXHS021_06D.11 T-DNA insertion segregating
    WISCSEQ_DSLOXHS021_06D.5 T-DNA insertion segregating

    Arabidopsis thaliana 3702

    Additional Information

    Transgene Description Promoter Reporter Marker
    pDsLoxHs T-DNA with Ds launch pad heat-shock inducible kanamycin

    Quality Control Comments

    Add your quality control comment here
    Comment Commented by Date
    new T-DNA insertions have been identified in this stock by TDNA-Seq, a method for next-generation sequencing performed in J. Ecker lab at SALK Institute ABRC 03/10/2015 To view detailed data, click here