Name / Stock Number: SALK_038385

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NASC stock number: N538385

Resource Type: seed

Availability: available

Donors:
  • Joseph Ecker

Donation Date: 01/30/2002

Date Released: 02/01/2002

Description:

Sequence-indexed T-DNA insertion line, segregating for annotated insertion; kanamycin was employed for selection of T1 plants; distribution seeds are T2 or T3 generation.

Growth Requirement: none

Marker:

Background: Col (Columbia)

ABRC Comment: NOTE: kanamycin resistance gene may be silenced; PCR- or hybridization-based segregation analysis is required to confirm presence of insertion; may be segregating for phenotypes that are not linked to the insertion; may have additional insertions potentially segregating.; Please cite the Alonso et al. reference linked to this stock and acknowledge ABRC for distributing the seeds in all presentations and publications utilizing this material.

Format Shipped: 100 seeds per vial

Base / Commercial Price: $15 / $120

Genes

Gene Names Evidence
AT1G68940
  • PUB42
    		•  polymorphism SIGnAL TAIR ARAPORT
    AT1G60290 polymorphism SIGnAL TAIR ARAPORT
    AT1G53100 polymorphism SIGnAL TAIR ARAPORT
    AT5G04480
  • BUP
  • Bursting pollen
    		•  polymorphism SIGnAL TAIR ARAPORT
    AT1G60330 polymorphism SIGnAL TAIR ARAPORT
    AT1G05233 polymorphism SIGnAL TAIR ARAPORT
    AT1G09023 polymorphism SIGnAL TAIR ARAPORT
    AT1G60300 polymorphism SIGnAL TAIR ARAPORT
    AT1G16510
  • SAUR41
  • SMALL AUXIN UPREGULATED 41
    		•  polymorphism SIGnAL TAIR ARAPORT

    Germplasm

    2

    Polymorphisms

    Polymorphism Mutagen Genotype Inheritance Gene Evidence attribution
    SALKSEQ_038385.3 T-DNA insertion segregating
  • AT1G60290
  • AT1G60300
    		• SIGnAL
    SALKSEQ_038385.2 T-DNA insertion segregating
  • AT1G53100
    		• SIGnAL
    SALKSEQ_038385.6 T-DNA insertion segregating
  • AT5G04480
    		• SIGnAL
    SALKSEQ_038385.4 T-DNA insertion segregating
  • AT1G60330
    		• SIGnAL
    SALKSEQ_038385.5 T-DNA insertion segregating
  • AT1G05233
  • AT1G16510
    		• SIGnAL
    SALK_038385.16.30.X T-DNA insertion segregating
  • AT1G09023
  • AT1G68940
    		• SIGnAL

    Arabidopsis thaliana 3702

    Additional Information

    DOI PubMed
    10.1126/science.1086391 12893945
    Transgene Description Promoter Reporter Marker
    pROK2 T-DNA kanamycin

    Quality Control Comments

    Add your quality control comment here
    Comment Commented by Date
    new T-DNA insertions have been identified in this stock by TDNA-Seq, a method for next-generation sequencing performed in J. Ecker lab at SALK Institute ABRC 03/10/2015 To view detailed data, click here