Name / Stock Number: SALK_053686

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NASC stock number: N553686

Resource Type: seed

Availability: available

Donors:
  • Joseph Ecker

Donation Date: 03/28/2002

Date Released: 04/02/2002

Description:

Sequence-indexed T-DNA insertion line, segregating for annotated insertion; kanamycin was employed for selection of T1 plants; distribution seeds are T2 or T3 generation.

Growth Requirement: none

Marker:

Background: Col (Columbia)

ABRC Comment: NOTE: kanamycin resistance gene may be silenced; PCR- or hybridization-based segregation analysis is required to confirm presence of insertion; may be segregating for phenotypes that are not linked to the insertion; may have additional insertions potentially segregating.; Please cite the Alonso et al. reference linked to this stock and acknowledge ABRC for distributing the seeds in all presentations and publications utilizing this material.

Format Shipped: 100 seeds per vial

Base / Commercial Price: $15 / $120

Genes

Gene Names Evidence
AT5G15320 polymorphism SIGnAL TAIR ARAPORT
AT3G44970 polymorphism SIGnAL TAIR ARAPORT
AT4G23160
  • CRK8
  • cysteine-rich RLK (RECEPTOR-like protein kinase) 8
    		•  polymorphism SIGnAL TAIR ARAPORT
    AT2TE01790 polymorphism SIGnAL TAIR ARAPORT
    AT5TE28500 polymorphism SIGnAL TAIR ARAPORT
    AT5G39540 polymorphism SIGnAL TAIR ARAPORT
    AT1G71040
  • LPR2
  • Low Phosphate Root2
    		•  polymorphism SIGnAL TAIR ARAPORT
    AT2G01940
  • ATIDD15
  • IDD15
  • SGR5
  • ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 15
  • INDETERMINATE(ID)-DOMAIN 15
  • SHOOT GRAVITROPISM 5
    		•  polymorphism SIGnAL TAIR ARAPORT
    AT5G23400 polymorphism SIGnAL TAIR ARAPORT
    AT5G39550
  • ORTHRUS 1
  • VARIANT IN METHYLATION 3
  • ORTH1
  • VIM3
    		•  polymorphism SIGnAL TAIR ARAPORT
    AT4TE56270 polymorphism SIGnAL TAIR ARAPORT
    AT1G71050
  • HIPP20
  • heavy metal associated isoprenylated plant protein 20
  • AtHMP15
  • HEAVY METAL ASSOCIATED PROTEIN 15
    		•  polymorphism SIGnAL TAIR ARAPORT

    Germplasm

    2

    Polymorphisms

    Polymorphism Mutagen Genotype Inheritance Gene Evidence attribution
    SALKSEQ_053686.6 T-DNA insertion segregating
  • AT5G23400
  • AT5TE28500
    		• SIGnAL
    SALKSEQ_053686.4 T-DNA insertion segregating
  • AT5G39540
  • AT5G39550
    		• SIGnAL
    SALKSEQ_053686.5 T-DNA insertion segregating
  • AT5G15320
    		• SIGnAL
    SALKSEQ_053686.1 T-DNA insertion segregating
  • AT3G44970
    		• SIGnAL
    SALKSEQ_053686.2 T-DNA insertion segregating
  • AT4G23160
  • AT4TE56270
    		• SIGnAL
    SALK_053686.51.90.X T-DNA insertion segregating
  • AT2G01940
  • AT2TE01790
    		• SIGnAL
    SALK_053686.49.35.x T-DNA insertion segregating
  • AT1G71040
  • AT1G71050
    		• SIGnAL

    Arabidopsis thaliana 3702

    Additional Information

    DOI PubMed
    10.1126/science.1086391 12893945
    Transgene Description Promoter Reporter Marker
    pROK2 T-DNA kanamycin

    Quality Control Comments

    Add your quality control comment here
    Comment Commented by Date
    new T-DNA insertions have been identified in this stock by TDNA-Seq, a method for next-generation sequencing performed in J. Ecker lab at SALK Institute ABRC 03/10/2015 To view detailed data, click here